FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70044004
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA1614650.09.956484120
ACACGTC613900.09.820148120
ATCGGAA1523250.09.759994120
AGATCGG1779250.09.525721120
ACGTCTG536450.09.443453120
CGTCTGA473450.09.441971120
TCGGAAG1486800.09.323477120
TAGATCG571900.09.236817120
CGGAAGA1430400.09.043341120
CACGTCT609150.08.918903120
CACACGT768950.08.708533120
GCACACG827900.08.524484120
AAGATCG654300.07.926442120
AGAGCAC1348850.07.457969120
CAGATCG500600.07.2232327120
GAGATCG688350.07.0885835120
GAGCACA1318800.07.053075120
AGCACAC1190150.07.0319114120
GAAGAGC1750850.06.70778120
AAGAGCA1778250.06.2085648120
Produced by FastQC (version 0.11.5)