FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49709449
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA867950.09.877083120
AGATCGG960750.09.461557120
ATCGGAA824550.09.426578120
ACACGTC351000.09.101144120
TAGATCG312600.08.98745120
TCGGAAG818700.08.935469120
ACGTCTG319800.08.40887120
CGGAAGA806900.08.402583120
CGTCTGA283150.08.392456120
CACACGT450750.08.24824120
CACGTCT362050.07.909462120
GCACACG494100.07.8167953120
CAGATCG281950.07.596026120
AAGATCG368450.06.7351513118-119
GAAGAGC1062650.06.385978120
AGCACAC725500.06.2108774120
AGAGCAC801350.06.163529120
GAGATCG460700.05.941577120
GAGCACA799050.05.9252863120
AAGAGCA1086850.05.7511473120
Produced by FastQC (version 0.11.5)