FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18901752
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC390750.09.118606120
CGTCTGA313200.08.982392120
ACGTCTG345500.08.889204120
CACACGT454100.08.454141120
CACGTCT377350.08.409154120
GCACACG488100.07.730059120
AGAGCAC681550.07.6834717120
TCGGAAG808250.07.6070995120
GATCGGA874000.07.350536120
CGGAAGA779300.07.335491120
AGATCGG939150.07.3068805120
ATCGGAA832900.07.2667346120
TAGATCG283200.06.926207120
GAGCACA658650.06.9032793120
AGCACAC595800.06.8159933120
GAAGAGC835700.06.7327642120
TCTGAAC382700.06.692839120
AAGAGCA814500.06.650245120
GTCTGAA400900.06.6433616120
AAGATCG306550.06.5160418120
Produced by FastQC (version 0.11.5)