FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331401

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331401
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14939331
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA717800.07.7887993120
GTCTGAA754750.07.590288120
ACGTCTG768000.07.5218225120
TATCTCG108400.07.470721120
ACACGTC856900.07.434511120
CCAGTCA434350.07.416389120
CACGTCT821850.07.3866243120
GCACACG1014500.07.3793926120
TCTGAAC701150.07.2807593120
CACACGT946050.07.1587615120
TCCAGTC488200.07.052972120
CTGAACT685950.06.9698577120
GTCACAT343800.06.961857120
CTCGTAT92700.06.794658120
GAGCACA1204850.06.74628120
CTCCAGT561750.06.7382064120
AACTCCA596950.06.7227383120
AGTCACA402350.06.6644073120
CAGTCAC425750.06.636274120
GAACTCC671550.06.50296120
Produced by FastQC (version 0.11.5)