FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005331479

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331479
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1223
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCG50.4088307440719542No Hit
GCCACAGGAAAACATATTTCCTTACCGAACTTCCTTTCCCAGCAAGAATCC40.3270645952575634No Hit
AGGGGATTCTCCTGCCTCAGCCTCCCGAGTAACTGGAATTACAGGCACCTG40.3270645952575634No Hit
GCGGCCTGTCTGGAGGGGCTGAGGCTTCGGCCTCGGGAGGCTGAAGCAGGA40.3270645952575634No Hit
CTGTAATCCCAGCTACTTAGGAGGCTGAGACAAGAGAATCACTTGAACCCA40.3270645952575634No Hit
ACCAGCTCCTCCTCCTTGGCCATCATCTCCTCCTCCTGCCGGCTCACCTGC30.24529844644317253No Hit
CCGCTTTGGGCTGCATTCCCAAACAACCCGACTCCGGGAAGACCCGGGCCC30.24529844644317253No Hit
GTCTCAGTGAGCATCTGCTGAAGGAGTAAATGGAAAGCTGAAATTGGCTAA30.24529844644317253No Hit
CGGTACATGTTGTGGGTGCCGCTCCGGGAGTCATAGCGCAGCCAGATCCCG30.24529844644317253No Hit
GGACACTAGTGTCAGAGGCTGGACGTGGCTGGCCCATCCTCCCTTGGCCCC30.24529844644317253No Hit
CCTCTCCCCCGGATTTTCAAGGGCCAGCGAGAGCTCACCGGACGCCGCCGG30.24529844644317253No Hit
GCACGATCTCAGCTCACTGCAAGCTCCACCTCCCGGGCTCACGCCATTCTC30.24529844644317253No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTC30.24529844644317253No Hit
CCAGGCTCAAGTGATCCTCCCATATCAGCCTGCCAAGTAGTTGGGACTACA30.24529844644317253No Hit
AAAAGAATCATGGTTCTTGGCTAGACGCATTGGCTCATAACTGTAATCCCA30.24529844644317253No Hit
CTTCCCTTCTCCCAAAGAGCACACTCCGGCAGCAACAGTGACTGAGGCCTG30.24529844644317253No Hit
CACAAACGGGCGAGGGCCGGGGACCGCGAGGGCAAGGGCACCCGGGAGCCC30.24529844644317253No Hit
CCTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTG20.1635322976287817No Hit
CGCCAAAATCTGCCTGTTTTCTTCCTTCTCCAGCTTCTCGAAGTGCTCCCG20.1635322976287817No Hit
GGGGATACGGGGTTTGCGCAGGGGTTTAACATCGAAGCTGTTCAGAGGTTG20.1635322976287817No Hit
GCTGCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCC20.1635322976287817No Hit
GTTAGGCAGGATGGTCTCGATCTCCTGACCTTATGATCCGCCTGCCTTGGC20.1635322976287817No Hit
GCCGGGTAAAGAGTATCACTGCCTCGACTCCCCATCCAGAAGGCCTGCCTT20.1635322976287817No Hit
GCCAACATGGTGAAACCCTGTCTCTACCAAAAATACAAAAATTAACCGGGC20.1635322976287817No Hit
GTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACCC20.1635322976287817No Hit
GTTTGAGTCCTTGCTCTGCCATCTAGTAGCTGTGTACCCTTCAGTGAGTCA20.1635322976287817No Hit
CCGGCCCGGAGCGGACGAGCCGCCCCGGCGGTGAACGGGGAGGAGGCGGGA20.1635322976287817No Hit
GTCATGAGATCAAGACCAGCCTGGCCAATAAGGTAAAACCCCGTCTCTACT20.1635322976287817No Hit
GCGCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC20.1635322976287817No Hit
CAACATGGTGAAACCCCATCTCTACTAAAAACACAAAAAACAGCTGGGCGT20.1635322976287817No Hit
ACCTATAATTCCAACACTTTGGAAAGCTAAGGTGGTAGGATCACTTGAGGC20.1635322976287817No Hit
CCCATCCAGATTCTTTTGGACAATCCTATTAAATACAGCTTCGAGGTCTAT20.1635322976287817No Hit
CCAGAAGTTGCTTGAAAGGTAATGTTCACTCACCATGCATTTTCCACTTAA20.1635322976287817No Hit
GGCAGCAGGAGCACACCGTGCTTCATTCATATGATCTTTTTTTTTTTTTTT20.1635322976287817No Hit
CTGGTTTCCCATCACTTCCTGGTCCTCCTGGACTTCCGGGCATGCCCCTCA20.1635322976287817No Hit
AACTAAACAAGATATTGAACAATATACTGGCTCTTCATATCTAGGTCTAAA20.1635322976287817No Hit
GAGAAACAAAGCCCGGGCGCTGTGGCTCACACCTGTAATCCCAGGACTTTG20.1635322976287817No Hit
AATGCATGTCTGCTCTTTCTTTTCTTTCTTCTTTCTTTCTTTCTTTCTCTT20.1635322976287817No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACC20.1635322976287817No Hit
CCCAGTCTGACCTCGCGCGGAGCCCCGTTCTCTGGGAACTCACCTCCCCGA20.1635322976287817No Hit
CATGCATATTGGGGTCCCATCAGGGGGACATGCCCACTCCAGGCCACACCC20.1635322976287817No Hit
GGGCGCCCTGCCCTTCACAAAGAAAAGAGAACTCTCCCCGGGGCTCCCGCC20.1635322976287817No Hit
CGAGGTTTCACCATGTTGGTCAAGCTGGTCTCGAACTCCTGACCTCAGGTG20.1635322976287817No Hit
AGGAAGGACGCGCGAGGGCCGGGACCCCGGGTGGCCGCCCCACCGGGGCCC20.1635322976287817No Hit
CTCAGACAGGCGTAGCCCGGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAA20.1635322976287817No Hit
TTTTTCAGGATGTCTTTCTGCTGAACCAGGTCCTTCTCCAAGTTCACTAGC20.1635322976287817No Hit
CAGGTGTGGTGGCACGTGCTATAGTCCCAGCTACATAGGAGGCTGAGGTGA20.1635322976287817No Hit
GTGGGTAGCCGACATCGCCGCCGACCCCGTGCGCTCGCTCCGCCGTCCCCC20.1635322976287817No Hit
ATCCCAGCGGTTTGGAAGGCCAAGGCAGGATCACTTGAGCCCAGGAGTTCC20.1635322976287817No Hit
CTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCT20.1635322976287817No Hit
GTCGTGAGTGCCTGTAATCCCAGCCACTCAGGAGGCTGAGGCAGGAGAATC20.1635322976287817No Hit
CGGGCGACATGGGTTTTCTCTCCCAGGGACACCCACATCCACTTGGGGAAG20.1635322976287817No Hit
GGGGAGGGCGCGCGACCCCGGTCGGCGCGCCCCGCTTCTTCGGTTCCCGCC20.1635322976287817No Hit
CCCACCCCCACCACCACGCCCGCGGTCGGCGGGAGAGGCCGGGAGGGAGGA20.1635322976287817No Hit
CTTTTGAGGGACAGGCTCCTTCTGGGTGAGTCTGGAGGCTGGAACTGTTCT20.1635322976287817No Hit
GGGGGAGGGCGCGCGACCCCGGTCGGCGCGCCCCGCTTCTTCGGTTCCCGC20.1635322976287817No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1635322976287817No Hit
GGCAGAGGGCTTTCCCGGAGTGGAGGCCACAGAGGCCTCTGGGAGCCTTCT20.1635322976287817No Hit
CCCCTGAATAGCTGGGACTACAGGCACGCACCACCACGCCCAGCTAATTTT20.1635322976287817No Hit
CGGATTTTCAAGGGCCAGCGAGAGCTCACCGGACGCCGCCGGAACCGCGAC20.1635322976287817No Hit
GTGAAACCCTATCTCTACTAAAAATATAAAAATTAGCCAGACATGGTGGCG20.1635322976287817No Hit
GGACGGACGGACGGACGGACGGGGCCCCCCGAGCCACCTTCCCCGCCGGGC20.1635322976287817No Hit
CCGGACCCCGTCCCGGCCCGGAGCGGACGAGCCGCCCCGGCGGTGAACGGG20.1635322976287817No Hit
GTGGAACTCTTTGAGCTCATCCTCTGTGAGGGGAAGGCAATTCTCATCATT20.1635322976287817No Hit
GGCTAATTCTGTATTTTAGCAGAGATGGGGTTTCACCATGTTGGTCATGCT20.1635322976287817No Hit
CTCGCATTCCACGCCCGGCTCCACGCCAGCGAGCCGGGCTTCTTACCCATT20.1635322976287817No Hit
AGCTAATTTTTGTACTTGTAGCAGAGATGGGGTTTTGTCATGTTGGCCAGT20.1635322976287817No Hit
GTAGAGTCAGACGGACCTCACCTTTCCTTCCCCCACATCTTCCTGTGGATA20.1635322976287817No Hit
GCCGCTACCGGCCTCACACCGTCCACGGGCTGGGCCTCGATCAGAAGGACT20.1635322976287817No Hit
CTGCACTGTTACCGGCTAAGTTTGAGACTCCATACAAGTCGGAACATGGAG20.1635322976287817No Hit
CTCCTCTCCAGACAGTGGCTCTGAAGGCCCTGCTTGGGAAATATCCAAGCT20.1635322976287817No Hit
CTTCAAGATCTTTTTTTTTGAGACGGAGTCTCACTCTGTTGCCCAGACTGG20.1635322976287817No Hit
CCAGGGTTATTTTTTTCACAAGAAGAGGTGTCAACGTTATGTTAACTTGAA20.1635322976287817No Hit
CTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCC20.1635322976287817No Hit
CCAAGCAAGGTGGCACACACCTGTAGATCCAGCTACTTAGGAGCCTGAGGT20.1635322976287817No Hit
GTTCTCTCCAACTGAATGTACATTCTATAGCAAAAAGCCAAAGTCTCTGTC20.1635322976287817No Hit
CAGAGTTTCACTCTTGTTACCCAGGCTAGAGGGCAATGGTGCAATCTTGGG20.1635322976287817No Hit
CCTCGATCTCCCAGGCTTTCTTTGACGGTGTTCCCTCAAAGAAAGAGGCCC20.1635322976287817No Hit
CCTGCCTTGGCCTTCCAAAGTGCTGGGATTACAGGTGTGAGCCACGGCACC20.1635322976287817No Hit
TAGACATCTGCCATGTCAGCCAAAATCAGCAACCGGATAACAGCAGAGAGC20.1635322976287817No Hit
GACGTGGTAGCGCATGCCTGTAATCCCTGCCACTCAGAAGACTGAGGCAGG20.1635322976287817No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)