FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005331559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52599689
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGCGGAGGAGA671890.12773649669297474No Hit
GGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTGACTTGGGTTAATCG616230.11715468507808098No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)