EGAF00005331609 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005331609
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20145827
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	704735	3.4981686281729707	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	33095	0.1642771974563268	No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCC	32382	0.16073800296210228	No Hit
CTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTT	32070	0.15918929513293248	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31716	0.15743210740368216	No Hit
AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	27700	0.137497457910266	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	27116	0.13459859453771741	No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC	24831	0.12325629521190667	No Hit
CGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCCGAG	20954	0.1040116149116142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	3440	34.748096	1
CGTCTGA	3530	33.142666	16
ATCGGAA	3670	32.986763	2
TCGTATG	2690	32.201244	45
ACACGTC	3670	31.94023	13
ACGTCTG	3695	31.906242	15
TCGGAAG	3930	31.090488	3
TTTCGGA	2940	29.923544	35
TCGGAAT	3070	29.241076	37
TCTCGTA	3185	28.538471	43
ACCGCGT	870	28.446722	6
CGGAAGA	4460	27.799017	4
CACACGT	4565	26.565275	12
CACGTCT	4485	26.336355	14
CTCGTAT	3385	26.18764	44
GCACACG	4625	26.171999	11
CCGCGTT	980	25.483746	7
ATCTCGT	3615	24.77043	42
TGTTTCG	1445	24.757847	33
GTTACGT	1080	23.958452	29