Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005331631 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19180704 |
Sequences flagged as poor quality | 0 |
Sequence length | 126 |
%GC | 26 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGTCAC | 20 | 8.199904E-4 | 90.0174 | 120 |
TCCGATC | 130 | 0.0 | 73.84213 | 8 |
CTTCCGA | 115 | 0.0 | 73.04217 | 6 |
CCGATCT | 125 | 0.0 | 71.996086 | 9 |
CGCCAGT | 70 | 1.6189006E-10 | 68.58468 | 120 |
GCTCTTC | 125 | 0.0 | 67.200195 | 3 |
ACGCTCT | 115 | 0.0 | 62.645786 | 1 |
CGCTCTT | 115 | 0.0 | 62.624874 | 2 |
TCTTCCG | 135 | 0.0 | 62.220947 | 5 |
TCCCTAC | 40 | 1.7012964E-4 | 59.99674 | 8 |
CTCTTCC | 145 | 0.0 | 57.931206 | 4 |
CCCTACA | 45 | 3.0446096E-4 | 53.330433 | 9 |
GGATGCC | 75 | 1.3877107E-6 | 48.00928 | 120 |
TTCCCTA | 55 | 8.18823E-4 | 43.635468 | 7 |
TTCCGAT | 245 | 0.0 | 41.631798 | 7 |
AGTCACC | 185 | 0.0 | 38.92644 | 120 |
ATCTCCA | 125 | 2.762863E-8 | 38.407425 | 120 |
TATGCCC | 85 | 1.6274783E-4 | 35.30094 | 120 |
GCACCGG | 35 | 0.0026787037 | 34.28376 | 108-109 |
CTGCTTC | 110 | 1.9253263E-5 | 32.7336 | 120 |