FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19180704
Sequences flagged as poor quality0
Sequence length126
%GC26

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTCAC208.199904E-490.0174120
TCCGATC1300.073.842138
CTTCCGA1150.073.042176
CCGATCT1250.071.9960869
CGCCAGT701.6189006E-1068.58468120
GCTCTTC1250.067.2001953
ACGCTCT1150.062.6457861
CGCTCTT1150.062.6248742
TCTTCCG1350.062.2209475
TCCCTAC401.7012964E-459.996748
CTCTTCC1450.057.9312064
CCCTACA453.0446096E-453.3304339
GGATGCC751.3877107E-648.00928120
TTCCCTA558.18823E-443.6354687
TTCCGAT2450.041.6317987
AGTCACC1850.038.92644120
ATCTCCA1252.762863E-838.407425120
TATGCCC851.6274783E-435.30094120
GCACCGG350.002678703734.28376108-109
CTGCTTC1101.9253263E-532.7336120
Produced by FastQC (version 0.11.5)