FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32186403
Sequences flagged as poor quality0
Sequence length126
%GC33

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGCTAA505.056364E-448.120262120
TACGACC505.056364E-448.120262120
CCGATCT1950.046.1467139
TCCGATC2150.041.858948
ACCGCAT757.685181E-540.10022120
AACCGCG600.001240911840.100216120
ACGCCAC1104.3211003E-738.27748120
CTACGCG650.001838867937.015587120
GCTACAA1303.824607E-837.015587120
CTTCCGA2450.036.733586
CCGCACA851.6055594E-435.382545120
CCCTCGC700.002645292334.371616120
CTCGCAC700.002645292334.371616120
CTACGAA902.2463719E-433.416847120
TCCACTA1658.4892235E-932.80927120
ACGCTCT2950.032.5519561
CTCGACC750.003709284132.080177120
AATCCGC953.0851952E-431.658064120
CTAGCAA1801.9814252E-830.075163120
CTAGACC800.005086684630.075161120
Produced by FastQC (version 0.11.5)