FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005331941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64567667
Sequences flagged as poor quality0
Sequence length125
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCTCGCTATCTCGTAT1482360.22958240073936695TruSeq Adapter, Index 1 (97% over 39bp)
GGAGAGGCGACGGGAGAGAGAGCGCGCGGCCGACGGCGCCCCCGCGCCGC714130.11060179702636615No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)