FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005331951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65025825
Sequences flagged as poor quality0
Sequence length125
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTCGATACATCTCGTAT1449870.22296833604187258TruSeq Adapter, Index 12 (97% over 37bp)
GGAGAGGCGACGGGAGAGAGAGCGCGCGGCCGACGGCGCCCCCGCGCCGC798450.12278967625554923No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)