FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005331967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61198520
Sequences flagged as poor quality0
Sequence length125
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAAGAACATCTCGTAT1076150.17584575574703443TruSeq Adapter, Index 2 (97% over 38bp)
GGAGAGGCGACGGGAGAGAGAGCGCGCGGCCGACGGCGCCCCCGCGCCGC654240.10690454605764975No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)