EGAF00005333288 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005333288
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8812211
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	63848	0.7245400728602618	No Hit
CCCGGTTTGTATTCGTACTGAAAATCAAAATCAAGTCAGCTTTTACCCTT	13847	0.15713423112542357	No Hit
GTCCCTATTAATCATTACCTCTTTGCGCAAACCAACAAAATAGCAAAAAA	13205	0.14984888582445427	No Hit
ACCCGTTAAAGCCATGGTAGGCCAATACCCTACCATCCAAAGCTGATAGGGCAGAAACTTGAATGATCCATCGCC	10873	0.12338560663152527	No Hit
TCCCGTTACCCGTTAAAGCCATGGTAGGCCAATACCCTACCATCCAAAGC	9543	0.1082929130952493	No Hit
GCTGCCTTCCTTGGATGTGGTAGCCGTCTCTCAGGCTCCCTCTCCGAAAT	9267	0.10516089548922514	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACCCGT	835	48.98148	1
GGCCCTA	1950	48.822113	1
TGCTAAT	25730	48.73539	70
AGGGTAT	4000	43.677616	70
GAGTCGG	3075	39.441357	70
GGCCCGT	1155	38.08899	1
TCGGCCA	4575	37.595142	42
AAGGGTA	3510	37.06791	69
ATGCTAA	26935	36.35322	69
TGCCCGT	1265	35.048595	1
GACCCTA	1760	34.36936	1
TACCAAG	7060	33.859085	44
CTGGAAC	2385	33.849888	5
GTCCTTA	1310	33.84464	1
CAGATGT	3485	33.574726	70
GTACCAA	11165	33.327938	43
CGGCCAA	5315	32.78482	43
GGTCCCT	1295	32.644257	1
CCAAGGT	13395	31.94279	46
CAAGGTC	7580	31.773016	47