FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7258933
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCAAT5000.00649617246.898399442
AGATCGG7853.3290914E-46.16264968
GATCGGA8155.390615E-45.935803469
TCGGAAG8306.806872E-45.8285367
GCCCTAC8450.0054215885.306607228
Produced by FastQC (version 0.11.5)