FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7301191
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTCGGG3900.00553168367.96122123
GATCGAG5957.777412E-57.538289562
AGATCGA7800.0020994195.7498161
ATCGAGA7550.0092002895.483788563
ACTGCGC11706.472237E-55.309191
AGATCGG9650.00463130465.005393569
Produced by FastQC (version 0.11.5)