FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7331254
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTCGA200.007366718351.73913220
GCGTCGT2100.004426007611.51368866
CCCGTTA2300.0087787710.50094756
GATCGGA7150.0049803055.797101565
TCGGAAG8800.0085457395.104121768
Produced by FastQC (version 0.11.5)