FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6375939
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG2700.002433772210.23757269
GTGTTCG3350.00140040869.2654645
GATCGGA8006.23141E-56.467993364
TCGGAAG8853.6505713E-56.24503466
ATCGGAA9459.463538E-55.848524665
AGATCGG8952.900378E-45.78176463
CGGAAGA10406.149565E-55.647846767
GGGCGGG8250.00406024565.438585853
ACCGCGC8300.00425824945.4166661
CCGCGCC9500.00380949825.0846532
Produced by FastQC (version 0.11.5)