FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6525835
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATCG500.007747182627.59294541
CGACGTC750.00199698222.99412242
CGGTTAG2050.003736981711.77747742
ATTAACG2850.00385140749.6856692
GGCCGCG3650.00304851778.50519829
GATCGGA10055.538084E-66.188576768
AGATCGG10501.1259197E-55.92335267
ATCGGAA10103.9371254E-55.81583269
CGGAGTC7350.006875125.63069534
TCGGAAG8650.00115210545.592374369
CGGAAGA10350.00199099375.007664768
Produced by FastQC (version 0.11.5)