FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6374464
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT2050.003690525211.79719369
CGGTAAA4550.00259515677.579528312
AGATCGG8401.6942924E-56.58069567
GATCGGA8107.244454E-56.397898768
ATCGGAA8259.329758E-56.28162369
Produced by FastQC (version 0.11.5)