FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7488922
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG3105.477933E-511.14624469
TCGGAAG9602.6219768E-66.478754567
AGAGCGT7350.00101129576.11147967
GATCGGA10207.069668E-66.096264465
AGATCGG9551.12262205E-45.77972564
CGGAAGA11404.2027772E-55.455793468
ATCGGAA11058.75746E-45.002063366
Produced by FastQC (version 0.11.5)