FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8548376
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2609.032763E-613.28923168
GCGTCGT2701.3323768E-512.79711369
TAGATCG4754.6169785E-58.72892868
CGGAAGA11609.21679E-65.659380468
TCGGAAG11609.21679E-65.659380467
AGAGCGT8050.00299896165.579826468
AGATCGG11605.5418815E-55.361549469
GATCGGA11302.1539138E-45.196718765
Produced by FastQC (version 0.11.5)