FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7811138
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGACCG2204.4415053E-412.54534858
GATCGGA9754.8578113E-76.723191768
AGATCGG9351.2324705E-56.27283567
ATCGGAA10106.1537503E-66.148620668
TCGGAAG9551.7086735E-56.14138869
CGCCTTC7400.00738110955.59461950
Produced by FastQC (version 0.11.5)