FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7811138
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGCAA950.00785590218.15087712
GCGTCGT2551.1067269E-412.1967569
AGCGTCG3055.819498E-410.19728368
GATCGGA9701.3703863E-45.700199669
AGATCGG10851.168546E-45.41303966
TCGGAAG9607.3010795E-45.39960369
Produced by FastQC (version 0.11.5)