FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8038272
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA12750.07.847223369
GATCGGA12507.2759576E-127.452155668
AGATCGG12759.094947E-117.035485367
TCGGAAG10755.3894837E-86.739675569
TAGATCG5700.0030996196.65815966
CGGAAGA12153.4123223E-65.67913169
AAGATCG8850.0092848925.067902669
Produced by FastQC (version 0.11.5)