FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7454797
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCATAA1850.001732041413.0489336
ATACCGC2100.004474102511.4970336
AGTTACG2950.00510519749.36042350
GATCGGA10750.08.6799469
TAGATCG4957.464186E-58.37794569
AGATCGG11551.8189894E-128.07862468
CGGAAGA9503.9062797E-87.275583369
TCGGAAG9502.2024433E-66.54802569
ATCGGAA11056.1024366E-76.255026369
GCGGATC7600.0097531215.454744366
Produced by FastQC (version 0.11.5)