FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6300205
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA6859.240466E-109.56940669
AGATCGG7353.1124728E-88.44903568
ATCGGAA6855.7601603E-57.05114169
ACCGCGC10653.2190837E-76.48092171
CGCGCCC8004.333876E-46.0375873
CCGCGCC11551.388782E-65.9741132
Produced by FastQC (version 0.11.5)