FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7679287
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA9904.446354E-66.27267669
AGATCGG10802.8184259E-66.06943468
CGGAAGA10557.8150406E-55.559268567
TGCCGAG8250.00407684275.436743748
TCGGAAG9809.837426E-45.280637766
Produced by FastQC (version 0.11.5)