FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6937433
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACCAT3055.9236225E-410.17761857
GATCGGA7400.00109633196.070574869
ACCGCGC8155.351753E-45.9391451
AGATCGG7750.0019138125.79462166
TCGGAAG7500.0084073645.52889369
Produced by FastQC (version 0.11.5)