FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7090945
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACCGAC2306.458513E-411.99949317
ACCGCGC12550.010.1732521
CGCGCCC10450.09.2437593
CCGCGCC14600.08.9791992
GATCGGA8655.9962986E-87.577927669
AGATCGG9251.9444997E-77.086486368
GCGCCCG10654.514004E-86.8026254
TGCGTGC6108.46711E-46.786933442
ACCGTGC11201.6394551E-86.77807661
CGCCCGG15603.6379788E-116.41328055
GAGTTCG10301.2523287E-66.364077662
ACCGCAC10456.746035E-55.6135091
GGCGACA8750.00135950175.51976717
CCGCACC11454.619197E-55.42342762
Produced by FastQC (version 0.11.5)