FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8262538
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATC2751.6393853E-512.54156745
GATCGGA8502.0225345E-56.50202168
AGATCGG8803.3624216E-56.280360767
ATCGGAA9358.1055725E-55.911608769
AGAGCGT8050.00300514335.57885169
Produced by FastQC (version 0.11.5)