FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8135344
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTAACG4400.00186081237.840681627
GATCGGA10106.1616374E-66.14814766
AGATCGG9551.7104101E-56.14099465
TCGGAAG10451.0695392E-55.942301368
ATCGGAA10305.4380136E-55.693834367
Produced by FastQC (version 0.11.5)