FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8135344
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGCGAC500.0077335627.60298260
TCGGAAG9301.5640217E-66.68586968
AGATCGG9902.9126004E-55.931739365
GATCGGA9751.4839723E-45.668702666
AGAGCGT7350.0067488145.640197869
CGGAAGA12302.4640798E-55.336406769
ATCGGAA10655.217884E-45.18965767
Produced by FastQC (version 0.11.5)