FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11000955
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT6151.15223746E-47.30276169
AGCGTCG6855.6699966E-57.05974668
CGTCGTG5956.2775787E-46.967599469
GATCGGA17850.06.773005568
AGATCGG20500.06.7410169
ATCGGAA19600.06.16922869
TAGATCG7750.00191227685.79509469
TCGGAAG18253.092282E-105.679070569
Produced by FastQC (version 0.11.5)