FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6707389
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTCAT2903.7133152E-410.7063242
GTTGCGG3900.0055285417.961706644
CGGAAGA9051.3273348E-77.242868468
GATCGGA7755.253176E-67.122265
ATCGGAA8451.8891928E-56.53219566
TCGGAAG8107.3925454E-56.388547467
AGATCGG8259.5150914E-56.272672764
GAGATCG10957.849361E-45.041239369
Produced by FastQC (version 0.11.5)