FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6707389
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG3209.0726174E-49.71592969
CGGAAGA9301.5654477E-66.68543268
TCGGAAG9057.2996863E-66.4884467
GATCGGA8552.2047354E-56.46388865
ATCGGAA9854.013764E-66.31213466
AGATCGG8753.148147E-56.308652464
Produced by FastQC (version 0.11.5)