FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7950862
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA9953.208597E-55.89432864
GATCGGA8852.4881278E-45.847388369
TCGGAAG9809.843935E-45.280383665
AGATCGG9850.00105341065.25364662
CGGAAGA10856.908482E-45.08730566
Produced by FastQC (version 0.11.5)