FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6954518
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCATCGG2950.00512606989.35577264
AGCGTCG3850.00485645758.07734769
CCGAAAT4150.0095113137.493441669
GATCGGA9251.4274246E-66.723021568
ATCGGAA10652.1622436E-66.16440169
AGATCGG10501.1281034E-55.92266267
Produced by FastQC (version 0.11.5)