FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7292115
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT2751.6139025E-512.56065868
CGTCGTG3053.4031455E-612.45872969
TCGGCTA2357.74954E-411.74196
AGCGTCG2953.313898E-511.70908867
TCGGAAG10251.5821934E-76.73991166
AGATCGG11853.3144534E-76.121837669
AGAGCGT8509.2547806E-45.68970869
GAGCGTC11102.7587806E-55.601835769
ATCGGAA10901.2553991E-45.387291465
GATCGGA10705.666453E-45.159390461
ACCGCGC11703.6830423E-45.012631
Produced by FastQC (version 0.11.5)