FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6678038
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGCCC6000.00531069656.3237813
TCGGAAG9759.025622E-45.31474969
GCGGATC9300.002934695.19211968
CCGCGCC8800.00871244355.0956472
Produced by FastQC (version 0.11.5)