FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7629955
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG3104.076972E-612.25909468
GCGTCGT3105.478711E-511.14609569
CGTCGTG2900.0044006289.53058267
TCGTGTA4650.0031512677.430730369
AGATCGG10401.4432317E-66.311719467
GATCGGA9851.7145062E-45.61191667
TCGGAAG10507.106461E-55.594278369
ATCGGAA11706.3589825E-55.31513268
Produced by FastQC (version 0.11.5)