FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8356072
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA7957.6714405E-66.94315665
AGATCGG8451.3227467E-46.12415964
TCGGAAG8551.5546408E-46.052386367
ACTGCGC12951.7128568E-65.6043611
ATCGGAA9952.02272E-45.547513566
CGGAAGA11653.4565656E-45.034160668
Produced by FastQC (version 0.11.5)