FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6924514
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG7704.765501E-67.168933469
ATCGGAA8451.3225706E-46.12417168
GATCGGA8105.085118E-45.96287668
TCGGAAG7650.00166424455.862828369
ACTGCGC10952.1971611E-55.6821051
Produced by FastQC (version 0.11.5)