FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9105448
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGTAG5350.00159005487.09363419
AGATCGG9158.820078E-66.409924569
CTGCGTC6250.0080950886.072150733
GATCGGA9200.00255443325.250072569
TCGGAAG10100.00147133175.12341166
Produced by FastQC (version 0.11.5)