FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9105448
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2900.00440184969.53029769
CGCATCT5150.0086459686.697387715
AGATCGG10752.544135E-66.106039569
TCGGAAG10403.7312033E-45.31412666
CGGAAGA12804.7795715E-55.12730167
Produced by FastQC (version 0.11.5)