FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5936759
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACCAT2357.735298E-411.74440864
AGATCGG7604.7615868E-77.7173869
GATCGGA6754.747799E-57.155388463
CGTGAAT5804.762017E-47.137884638
ATCGGAA6805.232587E-57.10277564
TCGGAAG6956.974123E-56.94924465
CGGAAGA8107.3922856E-56.388524566
ACTGCGC9900.00109991225.236591
Produced by FastQC (version 0.11.5)