FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5936759
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCGCGG2150.0053355811.2286339
ACCGCGC8302.4237306E-77.4806341
GATCGGA6805.2266383E-57.10338963
ATCGGAA6805.23244E-57.102790464
TCGGAAG7501.8490822E-46.44915565
AGATCGG8107.236206E-56.398402769
CCGCGCC9702.1791544E-56.0449392
AAGAGCG8802.2564043E-45.889438669
CGGAAGA9459.4396775E-55.84952468
CGCCCGG10756.0801924E-45.1336075
Produced by FastQC (version 0.11.5)