FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7814842
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCAAG3300.00121670319.4093249
AGATCGG11950.08.37242869
TAGATCG5250.00130241487.228470368
ATCGGAA12051.4060788E-96.87127268
TCGGAAG11352.1442247E-86.687258769
GATCGGA11754.2609827E-86.459441767
Produced by FastQC (version 0.11.5)