FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6030505
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG5502.9217124E-58.15424565
GATCGGA6057.713357E-46.842722466
TCGGAAG6250.00111610686.62375668
ATCGGAA6450.00159364736.418367467
CGGAAGA7005.712466E-46.40733169
CGACAGA7150.0050435055.790476319
CCGCGCC10100.00147103155.1234032
Produced by FastQC (version 0.11.5)