FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8296880
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGCGC1500.006548918313.79503941
TAGATCG4250.00130494428.127954567
AGATCGG11001.1204975E-86.90876168
GATCGGA10058.0145765E-76.531300569
ATCACGC6600.00206911216.271341357
TCGGAAG9759.022242E-45.314944769
Produced by FastQC (version 0.11.5)